- Largest Known Heterotrophic Bacteria.
- Intestinal symbionts of tropical marine surgeonfish.
- Individual cigar-shaped cells may reach up to 600 µm in length and 80 µm in width. A large individual is a million times the volume of Escherichia coli.
- Relies on fermentation for energy conservation. The genome encodes a complete set of genes for the non-oxidative branch of the pentose phosphate pathway (PPP).
- Approximately 0.8% of the genes are >5 kb. Of these 21 genes, six are >10 kb and half of those are >15 kb. The largest gene encodes a 6,869-residue protein.
- Cells have numerous peritrichous flagella and regularly spaced flagellar motors are seen in thin sections of the cell envelope.
- The Ca. E. viviparus genome suggests that this microbial symbiont has adapted to maximize access to available organic carbon (e.g., algal carbohydrates) and nitrogen while the host gets nutritional benefits.
- The bacterium likely takes advantage of the Sodium-rich gut environment which is suitable to support a Sodium Motive Force for energy generation using a fermentative metabolism and to drive flagellar rotation.
- The few features shared by all bacterial behemoths include extreme polyploidy, polyphosphate synthesis, and thus far, unculturable in the lab.
| Genome feature | Value |
|---|---|
| Genome size (bp) | 3,282,201 |
| Contigs | 7 |
| Max contig length (bp) | 905,387 |
| N50 (bp) | 602,975 |
| G + C content | 38.08% |
| Coding density | 91.96% |
| ORFs | 2,714 |
| Protein coding genes | 2,635 |
| tRNAs | 54 |
| 16S rRNA genes | 6 |
| 23S rRNA genes | 6 |
| 5S rRNA genes | 6 |
| Genome completeness based on CheckM (Bacillota) | 97% |
| Genome completeness based on CheckM (Clostridia) | 99% |
| Genome completeness based on conserved gene list | 92% |
Reference:
Sannino, D. R., Arroyo, F. A., Pepe-Ranney, C., Chen, W., Volland, J. M., Elisabeth, N. H., & Angert, E. R. (2023). The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force. Proceedings of the National Academy of Sciences, 120(52), e2306160120.






